Protein–RNA interactions for Protein: Q61290

Cacna1e, Voltage-dependent R-type calcium channel subunit alpha-1E, mousemouse

Predictions only

Length 2,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1eQ61290 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Cacna1eQ61290 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 AC154527.4-201ENSMUST00000224364 1667 ntBASIC16.25■□□□□ 0.19
Cacna1eQ61290 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Gm4535-201ENSMUST00000182274 558 ntBASIC16.25■□□□□ 0.19
Cacna1eQ61290 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Gm10355-201ENSMUST00000097146 517 ntBASIC16.25■□□□□ 0.19
Cacna1eQ61290 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Smox-204ENSMUST00000110181 2299 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC16.25■□□□□ 0.19
Cacna1eQ61290 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Gm9172-201ENSMUST00000212092 954 ntBASIC16.25■□□□□ 0.19
Cacna1eQ61290 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Cacna1eQ61290 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.24■□□□□ 0.19
Cacna1eQ61290 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.24■□□□□ 0.19
Cacna1eQ61290 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Cacna1eQ61290 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Gm11594-201ENSMUST00000122313 162 ntBASIC16.23■□□□□ 0.19
Cacna1eQ61290 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Cacna1eQ61290 Gm15173-201ENSMUST00000122049 433 ntBASIC16.22■□□□□ 0.19
Cacna1eQ61290 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 AC107711.5-202ENSMUST00000226429 702 ntBASIC16.22■□□□□ 0.19
Cacna1eQ61290 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
Cacna1eQ61290 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.22■□□□□ 0.19
Cacna1eQ61290 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1eQ61290 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC16.21■□□□□ 0.19
Cacna1eQ61290 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1eQ61290 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1eQ61290 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1eQ61290 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.21■□□□□ 0.19
Cacna1eQ61290 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1eQ61290 Gm14140-201ENSMUST00000119999 995 ntBASIC16.21■□□□□ 0.19
Cacna1eQ61290 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC16.21■□□□□ 0.19
Cacna1eQ61290 Gm42670-201ENSMUST00000201816 1292 ntBASIC16.21■□□□□ 0.19
Cacna1eQ61290 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1eQ61290 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Cacna1eQ61290 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms