Protein–RNA interactions for Protein: Q61079

Sim2, Single-minded homolog 2, mousemouse

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sim2Q61079 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
Sim2Q61079 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.18■□□□□ 0.18
Sim2Q61079 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC16.18■□□□□ 0.18
Sim2Q61079 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Sim2Q61079 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC16.18■□□□□ 0.18
Sim2Q61079 Gm43935-201ENSMUST00000203569 1050 ntBASIC16.18■□□□□ 0.18
Sim2Q61079 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC16.18■□□□□ 0.18
Sim2Q61079 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC16.18■□□□□ 0.18
Sim2Q61079 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Sim2Q61079 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC16.17■□□□□ 0.18
Sim2Q61079 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Sim2Q61079 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC16.17■□□□□ 0.18
Sim2Q61079 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
Sim2Q61079 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC16.17■□□□□ 0.18
Sim2Q61079 Gm6089-201ENSMUST00000197666 938 ntBASIC16.17■□□□□ 0.18
Sim2Q61079 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.17■□□□□ 0.18
Sim2Q61079 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
Sim2Q61079 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.17■□□□□ 0.18
Sim2Q61079 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Sim2Q61079 Acp7-201ENSMUST00000040112 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Sim2Q61079 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Gm14140-201ENSMUST00000119999 995 ntBASIC16.16■□□□□ 0.18
Sim2Q61079 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC16.16■□□□□ 0.18
Sim2Q61079 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Sim2Q61079 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC16.15■□□□□ 0.18
Sim2Q61079 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC16.15■□□□□ 0.18
Sim2Q61079 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sim2Q61079 AV026068-213ENSMUST00000223675 1171 ntBASIC16.15■□□□□ 0.18
Sim2Q61079 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Sim2Q61079 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Shroom3-211ENSMUST00000225438 5742 ntBASIC16.15■□□□□ 0.18
Sim2Q61079 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Sim2Q61079 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.14■□□□□ 0.18
Sim2Q61079 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.14■□□□□ 0.17
Sim2Q61079 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Gm9727-201ENSMUST00000161387 555 ntBASIC16.14■□□□□ 0.17
Sim2Q61079 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC16.14■□□□□ 0.17
Sim2Q61079 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 Gm7506-201ENSMUST00000207758 815 ntBASIC16.14■□□□□ 0.17
Sim2Q61079 AC090659.1-201ENSMUST00000224334 768 ntBASIC16.14■□□□□ 0.17
Sim2Q61079 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Sim2Q61079 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms