Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 AC140264.2-202ENSMUST00000218746 817 ntBASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 AC115863.1-201ENSMUST00000214815 1813 ntBASIC12.72□□□□□ -0.37
Trav7d-4Q5R1H9 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Mir2861-201ENSMUST00000175539 82 ntBASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Gm13241-201ENSMUST00000094493 780 ntBASIC12.71□□□□□ -0.37
Trav7d-4Q5R1H9 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trav7d-4Q5R1H9 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Nespas-201ENSMUST00000143738 1083 ntBASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Git2-204ENSMUST00000112185 5032 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Gm43598-201ENSMUST00000202482 2479 ntBASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trav7d-4Q5R1H9 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Gm6420-201ENSMUST00000193885 723 ntBASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Mvd-201ENSMUST00000006692 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trav7d-4Q5R1H9 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav7d-4Q5R1H9 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms