Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Gm10653-202ENSMUST00000139570 835 ntBASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Gm27011-201ENSMUST00000182352 972 ntBASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Gm29791-202ENSMUST00000207888 369 ntBASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Trav8d-1Q5R1H8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Gm13158-201ENSMUST00000122007 736 ntBASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Gm27275-201ENSMUST00000184318 272 ntBASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Trav8d-1Q5R1H8 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Gm13168-201ENSMUST00000121771 632 ntBASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Zfp783-201ENSMUST00000095946 670 ntBASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Gm43272-201ENSMUST00000200599 1584 ntBASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Trav8d-1Q5R1H8 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Gm37820-201ENSMUST00000194021 2147 ntBASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Gm11927-201ENSMUST00000118472 759 ntBASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Gm38285-201ENSMUST00000192928 922 ntBASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Trav8d-1Q5R1H8 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms