Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Scn2bQ56A07 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Scn2bQ56A07 AC069562.2-201ENSMUST00000224644 2146 ntBASIC16.43■□□□□ 0.22
Scn2bQ56A07 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Gm12085-201ENSMUST00000119263 940 ntBASIC16.43■□□□□ 0.22
Scn2bQ56A07 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.43■□□□□ 0.22
Scn2bQ56A07 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Gm5417-201ENSMUST00000079706 384 ntBASIC16.43■□□□□ 0.22
Scn2bQ56A07 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Scn2bQ56A07 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.42■□□□□ 0.22
Scn2bQ56A07 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Scn2bQ56A07 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Gm7638-201ENSMUST00000121348 967 ntBASIC16.41■□□□□ 0.22
Scn2bQ56A07 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Scn2bQ56A07 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Gm9731-201ENSMUST00000209480 747 ntBASIC16.4■□□□□ 0.22
Scn2bQ56A07 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Odf3b-204ENSMUST00000227834 930 ntBASIC16.4■□□□□ 0.22
Scn2bQ56A07 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Scn2bQ56A07 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms