Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
Pds5bQ4VA53 Gstz1-205ENSMUST00000222885 1571 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
Pds5bQ4VA53 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 AC117588.1-201ENSMUST00000228510 999 ntBASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Gm36967-201ENSMUST00000193814 266 ntBASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC28.77■■■□□ 2.2
Pds5bQ4VA53 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.2
Pds5bQ4VA53 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
Pds5bQ4VA53 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Best4-ps-201ENSMUST00000129783 1380 ntBASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Gm18889-201ENSMUST00000174284 929 ntBASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Rnaseh2a-201ENSMUST00000065049 1006 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
Pds5bQ4VA53 Gm43545-201ENSMUST00000196765 2779 ntBASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Mir449b-201ENSMUST00000104833 80 ntBASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 AC125206.2-201ENSMUST00000217454 574 ntBASIC28.74■■■□□ 2.19
Pds5bQ4VA53 AC124732.2-201ENSMUST00000221977 316 ntBASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
Pds5bQ4VA53 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Gm27301-201ENSMUST00000184012 127 ntBASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
Pds5bQ4VA53 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm5366-201ENSMUST00000215494 1338 ntBASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm5866-201ENSMUST00000177881 973 ntBASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Gm5628-201ENSMUST00000222318 1049 ntBASIC28.72■■■□□ 2.19
Pds5bQ4VA53 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms