Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Gm32996-201ENSMUST00000199828 1447 ntBASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ddx49Q4FZF3 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ddx49Q4FZF3 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Gm11779-201ENSMUST00000118541 368 ntBASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ddx49Q4FZF3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Gm5264-201ENSMUST00000190584 848 ntBASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ddx49Q4FZF3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Mir5126-201ENSMUST00000175513 77 ntBASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Ddx49Q4FZF3 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 AC159093.1-201ENSMUST00000227779 380 ntBASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Ddx49Q4FZF3 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Ddx49Q4FZF3 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.19■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms