Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Trim80Q3V061 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Trim80Q3V061 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.18■□□□□ 0.34
Trim80Q3V061 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Trim80Q3V061 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Trim80Q3V061 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Trim80Q3V061 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim80Q3V061 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.17■□□□□ 0.34
Trim80Q3V061 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.17■□□□□ 0.34
Trim80Q3V061 AC163280.1-201ENSMUST00000228194 1100 ntBASIC17.17■□□□□ 0.34
Trim80Q3V061 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Trim80Q3V061 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.17■□□□□ 0.34
Trim80Q3V061 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.17■□□□□ 0.34
Trim80Q3V061 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.16■□□□□ 0.34
Trim80Q3V061 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 AC140264.2-202ENSMUST00000218746 817 ntBASIC17.16■□□□□ 0.34
Trim80Q3V061 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Trim80Q3V061 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trim80Q3V061 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim80Q3V061 AC121577.1-201ENSMUST00000227302 707 ntBASIC17.15■□□□□ 0.34
Trim80Q3V061 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Flg-201ENSMUST00000050758 1488 ntBASIC17.15■□□□□ 0.34
Trim80Q3V061 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trim80Q3V061 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.15■□□□□ 0.34
Trim80Q3V061 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC17.15■□□□□ 0.34
Trim80Q3V061 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 AC108858.1-201ENSMUST00000228461 1498 ntBASIC17.14■□□□□ 0.33
Trim80Q3V061 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Trim80Q3V061 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.14■□□□□ 0.33
Trim80Q3V061 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trim80Q3V061 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.13■□□□□ 0.33
Trim80Q3V061 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Trim80Q3V061 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Gm11620-201ENSMUST00000118770 1845 ntBASIC17.13■□□□□ 0.33
Trim80Q3V061 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Trim80Q3V061 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms