Protein–RNA interactions for Protein: Q3USH5

Sfswap, Splicing factor, suppressor of white-apricot homolog, mousemouse

Known RBP Predictions only

Length 945 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SfswapQ3USH5 Gm44832-201ENSMUST00000208849 2303 ntBASIC19.74■□□□□ 0.75
SfswapQ3USH5 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SfswapQ3USH5 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC19.73■□□□□ 0.75
SfswapQ3USH5 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SfswapQ3USH5 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.72■□□□□ 0.75
SfswapQ3USH5 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.72■□□□□ 0.75
SfswapQ3USH5 Gm45606-201ENSMUST00000209836 2795 ntBASIC19.72■□□□□ 0.75
SfswapQ3USH5 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SfswapQ3USH5 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.7■□□□□ 0.74
SfswapQ3USH5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gm10052-201ENSMUST00000168019 960 ntBASIC19.7■□□□□ 0.74
SfswapQ3USH5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.7■□□□□ 0.74
SfswapQ3USH5 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Gm7729-201ENSMUST00000050143 801 ntBASIC19.7■□□□□ 0.74
SfswapQ3USH5 Birc2-201ENSMUST00000054878 378 ntBASIC19.7■□□□□ 0.74
SfswapQ3USH5 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SfswapQ3USH5 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SfswapQ3USH5 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms