Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Shisa3Q3UPR0 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.33□□□□□ -0.11
Shisa3Q3UPR0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Gm10138-203ENSMUST00000206952 366 ntBASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Prob1-201ENSMUST00000097619 3021 ntBASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Shisa3Q3UPR0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Gm10812-201ENSMUST00000099864 546 ntBASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Shisa3Q3UPR0 Gm16675-202ENSMUST00000208508 2586 ntTSL 2 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gm10698-201ENSMUST00000182663 604 ntBASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Shisa3Q3UPR0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm15375-201ENSMUST00000119510 849 ntBASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm15378-201ENSMUST00000121894 207 ntBASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm6576-201ENSMUST00000169678 883 ntBASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.3□□□□□ -0.12
Shisa3Q3UPR0 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 96.3 ms