Protein–RNA interactions for Protein: Q3UP38

Cracr2a, EF-hand calcium-binding domain-containing protein 4B, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cracr2aQ3UP38 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cracr2aQ3UP38 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gm5587-201ENSMUST00000206270 674 ntBASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gm10566-201ENSMUST00000086739 996 ntBASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cracr2aQ3UP38 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 CT010478.1-201ENSMUST00000220747 2787 ntBASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cracr2aQ3UP38 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cracr2aQ3UP38 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cracr2aQ3UP38 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms