Protein–RNA interactions for Protein: Q3UMB5

Smcr8, Guanine nucleotide exchange protein SMCR8, mousemouse

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smcr8Q3UMB5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Smcr8Q3UMB5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Smcr8Q3UMB5 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Gm7153-201ENSMUST00000117092 455 ntBASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Gm15794-201ENSMUST00000120182 631 ntBASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Smcr8Q3UMB5 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Smcr8Q3UMB5 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Smcr8Q3UMB5 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Gm42918-201ENSMUST00000199249 1580 ntBASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Smcr8Q3UMB5 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms