Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Q3U1D9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Q3U1D9 Gm16499-203ENSMUST00000204633 2177 ntBASIC14.39□□□□□ -0.11
Q3U1D9 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.38□□□□□ -0.11
Q3U1D9 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC14.38□□□□□ -0.11
Q3U1D9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Q3U1D9 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Q3U1D9 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.38□□□□□ -0.11
Q3U1D9 AC124569.2-201ENSMUST00000225998 818 ntBASIC14.38□□□□□ -0.11
Q3U1D9 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC14.38□□□□□ -0.11
Q3U1D9 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Q3U1D9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Q3U1D9 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC14.38□□□□□ -0.11
Q3U1D9 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.37□□□□□ -0.11
Q3U1D9 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC14.37□□□□□ -0.11
Q3U1D9 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC14.37□□□□□ -0.11
Q3U1D9 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Q3U1D9 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Q3U1D9 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Q3U1D9 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC14.36□□□□□ -0.11
Q3U1D9 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Q3U1D9 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.36□□□□□ -0.11
Q3U1D9 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Gm24589-201ENSMUST00000116692 94 ntBASIC14.36□□□□□ -0.11
Q3U1D9 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Q3U1D9 AC153889.1-201ENSMUST00000219257 330 ntBASIC14.36□□□□□ -0.11
Q3U1D9 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Q3U1D9 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC14.36□□□□□ -0.11
Q3U1D9 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Q3U1D9 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Q3U1D9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.35□□□□□ -0.11
Q3U1D9 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Q3U1D9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms