Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cul4aQ3TCH7 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Gm13186-201ENSMUST00000118031 316 ntBASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Cul4aQ3TCH7 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Gm21814-202ENSMUST00000203277 873 ntBASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Actl10-202ENSMUST00000226583 1501 ntBASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Cul4aQ3TCH7 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Vmn1r17-204ENSMUST00000228294 2084 ntAPPRIS ALT2 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Gm715-201ENSMUST00000117865 831 ntBASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Gm13168-201ENSMUST00000121771 632 ntBASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Cul4aQ3TCH7 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.39■□□□□ 0.38
Cul4aQ3TCH7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Cutc-202ENSMUST00000112047 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Cul4aQ3TCH7 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.38■□□□□ 0.37
Cul4aQ3TCH7 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms