Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.75■□□□□ 0.27
Ebf1Q07802 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Ebf1Q07802 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Ebf1Q07802 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm42918-201ENSMUST00000199249 1580 ntBASIC16.74■□□□□ 0.27
Ebf1Q07802 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm8969-201ENSMUST00000199694 526 ntBASIC16.74■□□□□ 0.27
Ebf1Q07802 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Ebf1Q07802 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Ebf1Q07802 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.74■□□□□ 0.27
Ebf1Q07802 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Ebf1Q07802 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ebf1Q07802 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 AC125311.2-201ENSMUST00000227477 1940 ntBASIC16.73■□□□□ 0.27
Ebf1Q07802 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Ebf1Q07802 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Ebf1Q07802 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Ebf1Q07802 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Ebf1Q07802 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.73■□□□□ 0.27
Ebf1Q07802 Gm5867-201ENSMUST00000063197 592 ntBASIC16.73■□□□□ 0.27
Ebf1Q07802 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.73■□□□□ 0.27
Ebf1Q07802 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Ebf1Q07802 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.72■□□□□ 0.27
Ebf1Q07802 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.72■□□□□ 0.27
Ebf1Q07802 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Gm13186-201ENSMUST00000118031 316 ntBASIC16.72■□□□□ 0.27
Ebf1Q07802 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.72■□□□□ 0.27
Ebf1Q07802 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.72■□□□□ 0.27
Ebf1Q07802 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC16.72■□□□□ 0.27
Ebf1Q07802 AW822252-206ENSMUST00000208904 237 ntBASIC16.72■□□□□ 0.27
Ebf1Q07802 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.72■□□□□ 0.27
Ebf1Q07802 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Ebf1Q07802 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Ebf1Q07802 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC16.71■□□□□ 0.27
Ebf1Q07802 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 Haglr-201ENSMUST00000100000 2085 ntBASIC16.71■□□□□ 0.27
Ebf1Q07802 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.71■□□□□ 0.27
Ebf1Q07802 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC16.71■□□□□ 0.27
Ebf1Q07802 Gm18733-201ENSMUST00000173950 856 ntBASIC16.71■□□□□ 0.27
Ebf1Q07802 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.71■□□□□ 0.27
Ebf1Q07802 Gm18195-201ENSMUST00000207604 706 ntBASIC16.71■□□□□ 0.27
Ebf1Q07802 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Ebf1Q07802 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
Ebf1Q07802 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms