Protein–RNA interactions for Protein: P97812

Ihh, Indian hedgehog protein, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IhhP97812 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IhhP97812 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
IhhP97812 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IhhP97812 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
IhhP97812 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
IhhP97812 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
IhhP97812 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.15■□□□□ 0.34
IhhP97812 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC17.15■□□□□ 0.34
IhhP97812 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
IhhP97812 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
IhhP97812 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IhhP97812 Gm10052-201ENSMUST00000168019 960 ntBASIC17.15■□□□□ 0.34
IhhP97812 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC17.15■□□□□ 0.34
IhhP97812 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.15■□□□□ 0.34
IhhP97812 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.15■□□□□ 0.34
IhhP97812 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Gm7729-201ENSMUST00000050143 801 ntBASIC17.15■□□□□ 0.34
IhhP97812 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IhhP97812 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
IhhP97812 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
IhhP97812 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
IhhP97812 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC17.14■□□□□ 0.33
IhhP97812 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC17.14■□□□□ 0.33
IhhP97812 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.14■□□□□ 0.33
IhhP97812 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 CT009713.7-201ENSMUST00000224689 571 ntBASIC17.14■□□□□ 0.33
IhhP97812 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
IhhP97812 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
IhhP97812 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
IhhP97812 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
IhhP97812 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IhhP97812 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
IhhP97812 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IhhP97812 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IhhP97812 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
IhhP97812 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
IhhP97812 Gm17971-201ENSMUST00000190239 806 ntBASIC17.13■□□□□ 0.33
IhhP97812 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.13■□□□□ 0.33
IhhP97812 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
IhhP97812 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
IhhP97812 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
IhhP97812 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
IhhP97812 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
IhhP97812 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
IhhP97812 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.12■□□□□ 0.33
IhhP97812 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms