Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Cacna1aP97445 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC15.27■□□□□ 0.04
Cacna1aP97445 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Cacna1aP97445 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Cacna1aP97445 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1aP97445 AC084391.1-201ENSMUST00000200651 141 ntBASIC15.27■□□□□ 0.03
Cacna1aP97445 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1aP97445 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1aP97445 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Cacna1aP97445 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1aP97445 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1aP97445 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Cacna1aP97445 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 AC154527.4-201ENSMUST00000224364 1667 ntBASIC15.26■□□□□ 0.03
Cacna1aP97445 Iqck-206ENSMUST00000208658 2891 ntBASIC15.26■□□□□ 0.03
Cacna1aP97445 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Gm7230-201ENSMUST00000173026 815 ntBASIC15.26■□□□□ 0.03
Cacna1aP97445 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Cacna1aP97445 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Cacna1aP97445 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Cacna1aP97445 AC160338.1-201ENSMUST00000214232 705 ntBASIC15.25■□□□□ 0.03
Cacna1aP97445 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Cacna1aP97445 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC15.25■□□□□ 0.03
Cacna1aP97445 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Gm27397-201ENSMUST00000184997 107 ntBASIC15.25■□□□□ 0.03
Cacna1aP97445 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.25■□□□□ 0.03
Cacna1aP97445 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cacna1aP97445 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
Cacna1aP97445 Gm13036-201ENSMUST00000117799 748 ntBASIC15.24■□□□□ 0.03
Cacna1aP97445 Gm5648-201ENSMUST00000122244 1587 ntBASIC15.24■□□□□ 0.03
Cacna1aP97445 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.24■□□□□ 0.03
Cacna1aP97445 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.24■□□□□ 0.03
Cacna1aP97445 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
Cacna1aP97445 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.24■□□□□ 0.03
Cacna1aP97445 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC15.24■□□□□ 0.03
Cacna1aP97445 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Cacna1aP97445 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Cacna1aP97445 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.23■□□□□ 0.03
Cacna1aP97445 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Cacna1aP97445 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms