Protein–RNA interactions for Protein: P86449

Trim43c, Tripartite motif-containing protein 43C, mousemouse

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43cP86449 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.05■□□□□ 0.48
Trim43cP86449 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim43cP86449 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim43cP86449 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim43cP86449 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim43cP86449 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim43cP86449 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim43cP86449 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim43cP86449 Gm37722-201ENSMUST00000193757 208 ntBASIC18.04■□□□□ 0.48
Trim43cP86449 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC18.04■□□□□ 0.48
Trim43cP86449 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
Trim43cP86449 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim43cP86449 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Trim43cP86449 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim43cP86449 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim43cP86449 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim43cP86449 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim43cP86449 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim43cP86449 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim43cP86449 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Trim43cP86449 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC18.02■□□□□ 0.48
Trim43cP86449 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim43cP86449 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim43cP86449 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.02■□□□□ 0.48
Trim43cP86449 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim43cP86449 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
Trim43cP86449 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trim43cP86449 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
Trim43cP86449 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim43cP86449 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Shroom3-211ENSMUST00000225438 5742 ntBASIC18.01■□□□□ 0.47
Trim43cP86449 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.01■□□□□ 0.47
Trim43cP86449 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Trim43cP86449 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim43cP86449 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 AC121577.1-201ENSMUST00000227302 707 ntBASIC18.01■□□□□ 0.47
Trim43cP86449 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.01■□□□□ 0.47
Trim43cP86449 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC18.01■□□□□ 0.47
Trim43cP86449 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trim43cP86449 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trim43cP86449 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms