Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Slc35b2-202ENSMUST00000223987 1766 ntBASIC17.96■□□□□ 0.47
CiitaP79621 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.96■□□□□ 0.47
CiitaP79621 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CiitaP79621 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC17.96■□□□□ 0.47
CiitaP79621 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
CiitaP79621 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CiitaP79621 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CiitaP79621 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC17.96■□□□□ 0.47
CiitaP79621 Gm44430-201ENSMUST00000203376 995 ntBASIC17.96■□□□□ 0.47
CiitaP79621 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CiitaP79621 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CiitaP79621 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CiitaP79621 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CiitaP79621 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CiitaP79621 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CiitaP79621 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CiitaP79621 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
CiitaP79621 AC124569.2-201ENSMUST00000225998 818 ntBASIC17.95■□□□□ 0.46
CiitaP79621 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CiitaP79621 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CiitaP79621 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Gm5898-201ENSMUST00000121016 2071 ntBASIC17.94■□□□□ 0.46
CiitaP79621 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC17.94■□□□□ 0.46
CiitaP79621 Gm13312-201ENSMUST00000119631 718 ntBASIC17.94■□□□□ 0.46
CiitaP79621 Gm10052-201ENSMUST00000168019 960 ntBASIC17.94■□□□□ 0.46
CiitaP79621 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CiitaP79621 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.94■□□□□ 0.46
CiitaP79621 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Gm7729-201ENSMUST00000050143 801 ntBASIC17.94■□□□□ 0.46
CiitaP79621 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CiitaP79621 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.94■□□□□ 0.46
CiitaP79621 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CiitaP79621 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.93■□□□□ 0.46
CiitaP79621 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CiitaP79621 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Gm27741-201ENSMUST00000185060 237 ntBASIC17.93■□□□□ 0.46
CiitaP79621 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC17.93■□□□□ 0.46
CiitaP79621 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
CiitaP79621 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.93■□□□□ 0.46
CiitaP79621 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
CiitaP79621 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.93■□□□□ 0.46
CiitaP79621 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.93■□□□□ 0.46
CiitaP79621 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CiitaP79621 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.92■□□□□ 0.46
CiitaP79621 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.92■□□□□ 0.46
CiitaP79621 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.92■□□□□ 0.46
CiitaP79621 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC17.92■□□□□ 0.46
CiitaP79621 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.92■□□□□ 0.46
CiitaP79621 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
CiitaP79621 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CiitaP79621 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.91■□□□□ 0.46
CiitaP79621 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms