Protein–RNA interactions for Protein: P70362

Ufd1, Ubiquitin recognition factor in ER-associated degradation protein 1, mousemouse

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufd1P70362 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Ufd1P70362 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC14.3□□□□□ -0.12
Ufd1P70362 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Dffb-201ENSMUST00000030893 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Ufd1P70362 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ufd1P70362 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ufd1P70362 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC14.29□□□□□ -0.12
Ufd1P70362 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Ufd1P70362 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Ufd1P70362 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ufd1P70362 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.28□□□□□ -0.12
Ufd1P70362 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Gm45417-201ENSMUST00000209533 758 ntBASIC14.28□□□□□ -0.12
Ufd1P70362 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Ufd1P70362 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ufd1P70362 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ufd1P70362 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.12
Ufd1P70362 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC14.27□□□□□ -0.12
Ufd1P70362 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Ufd1P70362 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ufd1P70362 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.27□□□□□ -0.12
Ufd1P70362 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.27□□□□□ -0.12
Ufd1P70362 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.27□□□□□ -0.13
Ufd1P70362 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
Ufd1P70362 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.27□□□□□ -0.13
Ufd1P70362 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Col16a1-201ENSMUST00000044565 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ufd1P70362 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ufd1P70362 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms