Protein–RNA interactions for Protein: P70279

Surf6, Surfeit locus protein 6, mousemouse

Known RBP Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Surf6P70279 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Surf6P70279 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Surf6P70279 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Surf6P70279 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.29■□□□□ 0.36
Surf6P70279 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Gm3807-201ENSMUST00000193520 1168 ntBASIC17.29■□□□□ 0.36
Surf6P70279 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.29■□□□□ 0.36
Surf6P70279 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Surf6P70279 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Surf6P70279 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Surf6P70279 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
Surf6P70279 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Surf6P70279 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
Surf6P70279 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Gm43598-201ENSMUST00000202482 2479 ntBASIC17.28■□□□□ 0.36
Surf6P70279 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
Surf6P70279 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Surf6P70279 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Gm13401-201ENSMUST00000117074 291 ntBASIC17.28■□□□□ 0.36
Surf6P70279 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Surf6P70279 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Surf6P70279 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Surf6P70279 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Surf6P70279 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.27■□□□□ 0.36
Surf6P70279 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Gm7290-201ENSMUST00000104990 617 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Gm12918-201ENSMUST00000120234 636 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Gm15710-201ENSMUST00000121821 636 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC17.27■□□□□ 0.36
Surf6P70279 Gm27011-201ENSMUST00000182352 972 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Gm5075-201ENSMUST00000196916 622 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC17.27■□□□□ 0.36
Surf6P70279 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
Surf6P70279 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Surf6P70279 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Surf6P70279 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.27■□□□□ 0.35
Surf6P70279 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Surf6P70279 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Surf6P70279 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Surf6P70279 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Surf6P70279 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.26■□□□□ 0.35
Surf6P70279 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
Surf6P70279 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.26■□□□□ 0.35
Surf6P70279 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC17.26■□□□□ 0.35
Surf6P70279 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.26■□□□□ 0.35
Surf6P70279 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.26■□□□□ 0.35
Surf6P70279 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Surf6P70279 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Surf6P70279 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
Surf6P70279 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Surf6P70279 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.25■□□□□ 0.35
Surf6P70279 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Surf6P70279 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.25■□□□□ 0.35
Surf6P70279 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Surf6P70279 AC107711.5-202ENSMUST00000226429 702 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms