Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC16.47■□□□□ 0.23
Crnkl1P63154 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Crnkl1P63154 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Crnkl1P63154 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.46■□□□□ 0.23
Crnkl1P63154 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Crnkl1P63154 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.46■□□□□ 0.23
Crnkl1P63154 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Crnkl1P63154 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crnkl1P63154 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crnkl1P63154 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.46■□□□□ 0.22
Crnkl1P63154 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC16.46■□□□□ 0.22
Crnkl1P63154 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crnkl1P63154 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crnkl1P63154 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Crnkl1P63154 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.45■□□□□ 0.22
Crnkl1P63154 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Crnkl1P63154 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Crnkl1P63154 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Crnkl1P63154 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Gm44549-201ENSMUST00000208351 577 ntBASIC16.45■□□□□ 0.22
Crnkl1P63154 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.45■□□□□ 0.22
Crnkl1P63154 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Crnkl1P63154 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Crnkl1P63154 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.44■□□□□ 0.22
Crnkl1P63154 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC16.44■□□□□ 0.22
Crnkl1P63154 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC16.44■□□□□ 0.22
Crnkl1P63154 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.44■□□□□ 0.22
Crnkl1P63154 Ube2d3-212ENSMUST00000197859 3833 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Crnkl1P63154 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Crnkl1P63154 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Crnkl1P63154 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Gm2559-201ENSMUST00000201323 363 ntBASIC16.43■□□□□ 0.22
Crnkl1P63154 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Crnkl1P63154 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Crnkl1P63154 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Crnkl1P63154 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Crnkl1P63154 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.42■□□□□ 0.22
Crnkl1P63154 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms