Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ThraP63058 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
ThraP63058 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.78■□□□□ 0.28
ThraP63058 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ThraP63058 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC16.78■□□□□ 0.28
ThraP63058 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
ThraP63058 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ThraP63058 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ThraP63058 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ThraP63058 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC16.77■□□□□ 0.28
ThraP63058 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ThraP63058 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ThraP63058 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Gm26917-202ENSMUST00000192833 3329 ntBASIC16.77■□□□□ 0.27
ThraP63058 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Gm8839-201ENSMUST00000121279 1645 ntBASIC16.77■□□□□ 0.27
ThraP63058 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ThraP63058 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Gm11620-201ENSMUST00000118770 1845 ntBASIC16.76■□□□□ 0.27
ThraP63058 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.76■□□□□ 0.27
ThraP63058 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.76■□□□□ 0.27
ThraP63058 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Gm7370-201ENSMUST00000219471 767 ntBASIC16.76■□□□□ 0.27
ThraP63058 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ThraP63058 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.75■□□□□ 0.27
ThraP63058 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC16.75■□□□□ 0.27
ThraP63058 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.75■□□□□ 0.27
ThraP63058 Gm37025-201ENSMUST00000195159 829 ntBASIC16.75■□□□□ 0.27
ThraP63058 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ThraP63058 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ThraP63058 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
ThraP63058 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Kctd1-202ENSMUST00000168989 3456 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ThraP63058 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
ThraP63058 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
ThraP63058 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ThraP63058 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
ThraP63058 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ThraP63058 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ThraP63058 CT010478.1-201ENSMUST00000220747 2787 ntBASIC16.74■□□□□ 0.27
ThraP63058 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms