Protein–RNA interactions for Protein: P62812

Gabra1, Gamma-aminobutyric acid receptor subunit alpha-1, mousemouse

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gabra1P62812 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Gabra1P62812 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.01□□□□□ -0.17
Gabra1P62812 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Gabra1P62812 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Gabra1P62812 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC14□□□□□ -0.17
Gabra1P62812 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Gabra1P62812 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Gabra1P62812 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Gabra1P62812 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14□□□□□ -0.17
Gabra1P62812 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14□□□□□ -0.17
Gabra1P62812 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC14□□□□□ -0.17
Gabra1P62812 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gabra1P62812 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Entpd6-201ENSMUST00000094467 2540 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Gabra1P62812 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Gabra1P62812 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Gabra1P62812 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Gabra1P62812 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Gabra1P62812 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
Gabra1P62812 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Gabra1P62812 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Gabra1P62812 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Gabra1P62812 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Ccdc166-201ENSMUST00000182172 2584 ntBASIC13.98□□□□□ -0.17
Gabra1P62812 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Gabra1P62812 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.98□□□□□ -0.17
Gabra1P62812 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gabra1P62812 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gabra1P62812 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
Gabra1P62812 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.98□□□□□ -0.17
Gabra1P62812 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Gabra1P62812 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
Gabra1P62812 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Gabra1P62812 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms