Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.87□□□□□ -0.51
Cks1bP61025 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC11.87□□□□□ -0.51
Cks1bP61025 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC11.87□□□□□ -0.51
Cks1bP61025 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Cks1bP61025 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.86□□□□□ -0.51
Cks1bP61025 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC11.86□□□□□ -0.51
Cks1bP61025 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Cks1bP61025 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.86□□□□□ -0.51
Cks1bP61025 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Cks1bP61025 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cks1bP61025 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC11.85□□□□□ -0.51
Cks1bP61025 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC11.85□□□□□ -0.51
Cks1bP61025 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Cks1bP61025 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC11.85□□□□□ -0.51
Cks1bP61025 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Cks1bP61025 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Pomgnt2-206ENSMUST00000216669 2504 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Cks1bP61025 Idnk-204ENSMUST00000226010 1898 ntBASIC11.85□□□□□ -0.51
Cks1bP61025 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Cks1bP61025 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Ccdc166-201ENSMUST00000182172 2584 ntBASIC11.84□□□□□ -0.51
Cks1bP61025 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC11.84□□□□□ -0.51
Cks1bP61025 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.84□□□□□ -0.51
Cks1bP61025 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC11.84□□□□□ -0.51
Cks1bP61025 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC11.84□□□□□ -0.51
Cks1bP61025 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Cks1bP61025 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC11.84□□□□□ -0.51
Cks1bP61025 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms