Protein–RNA interactions for Protein: P58854

Tubgcp3, Gamma-tubulin complex component 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp3P58854 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC16.94■□□□□ 0.3
Tubgcp3P58854 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Gm11539-201ENSMUST00000119837 557 ntBASIC16.94■□□□□ 0.3
Tubgcp3P58854 Gm13436-201ENSMUST00000120418 567 ntBASIC16.94■□□□□ 0.3
Tubgcp3P58854 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Tubgcp3P58854 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Lrp12-202ENSMUST00000110305 4244 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Tubgcp3P58854 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.92■□□□□ 0.3
Tubgcp3P58854 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Gm2274-201ENSMUST00000184539 609 ntBASIC16.92■□□□□ 0.3
Tubgcp3P58854 Gm7370-201ENSMUST00000219471 767 ntBASIC16.92■□□□□ 0.3
Tubgcp3P58854 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Tubgcp3P58854 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.91■□□□□ 0.3
Tubgcp3P58854 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Tubgcp3P58854 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.9■□□□□ 0.3
Tubgcp3P58854 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Tubgcp3P58854 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Tubgcp3P58854 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms