Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NrlP54846 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
NrlP54846 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NrlP54846 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
NrlP54846 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NrlP54846 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
NrlP54846 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NrlP54846 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC17.64■□□□□ 0.41
NrlP54846 Gm11452-201ENSMUST00000122376 690 ntBASIC17.64■□□□□ 0.41
NrlP54846 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC17.64■□□□□ 0.41
NrlP54846 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.64■□□□□ 0.41
NrlP54846 Gm29707-201ENSMUST00000196325 491 ntBASIC17.64■□□□□ 0.41
NrlP54846 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Gm44450-201ENSMUST00000199528 114 ntBASIC17.64■□□□□ 0.41
NrlP54846 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.64■□□□□ 0.41
NrlP54846 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NrlP54846 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NrlP54846 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
NrlP54846 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.63■□□□□ 0.41
NrlP54846 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.63■□□□□ 0.41
NrlP54846 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC17.63■□□□□ 0.41
NrlP54846 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 AC159301.1-201ENSMUST00000225130 1182 ntBASIC17.63■□□□□ 0.41
NrlP54846 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC17.63■□□□□ 0.41
NrlP54846 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
NrlP54846 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NrlP54846 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NrlP54846 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Gm18733-201ENSMUST00000173950 856 ntBASIC17.62■□□□□ 0.41
NrlP54846 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC17.62■□□□□ 0.41
NrlP54846 Gm18195-201ENSMUST00000207604 706 ntBASIC17.62■□□□□ 0.41
NrlP54846 AW822252-206ENSMUST00000208904 237 ntBASIC17.62■□□□□ 0.41
NrlP54846 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.62■□□□□ 0.41
NrlP54846 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC17.62■□□□□ 0.41
NrlP54846 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
NrlP54846 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NrlP54846 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
NrlP54846 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.61■□□□□ 0.41
NrlP54846 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Gm7935-201ENSMUST00000100555 1278 ntBASIC17.61■□□□□ 0.41
NrlP54846 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC17.61■□□□□ 0.41
NrlP54846 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
NrlP54846 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.61■□□□□ 0.41
NrlP54846 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.61■□□□□ 0.41
NrlP54846 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.61■□□□□ 0.41
NrlP54846 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
NrlP54846 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
NrlP54846 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
NrlP54846 Gm18421-201ENSMUST00000204122 625 ntBASIC17.6■□□□□ 0.41
NrlP54846 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
NrlP54846 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC17.6■□□□□ 0.41
NrlP54846 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms