Protein–RNA interactions for Protein: P54729

Nub1, NEDD8 ultimate buster 1, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nub1P54729 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Gm8587-201ENSMUST00000076538 843 ntBASIC17.85■□□□□ 0.45
Nub1P54729 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nub1P54729 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Nub1P54729 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Nub1P54729 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nub1P54729 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Nub1P54729 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
Nub1P54729 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.84■□□□□ 0.45
Nub1P54729 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.84■□□□□ 0.45
Nub1P54729 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Nub1P54729 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Nub1P54729 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Nub1P54729 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nub1P54729 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nub1P54729 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Nub1P54729 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nub1P54729 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Nub1P54729 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Nub1P54729 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Nub1P54729 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nub1P54729 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Nub1P54729 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Nub1P54729 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Nub1P54729 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Nub1P54729 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.82■□□□□ 0.44
Nub1P54729 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.82■□□□□ 0.44
Nub1P54729 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.82■□□□□ 0.44
Nub1P54729 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Nub1P54729 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.81■□□□□ 0.44
Nub1P54729 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.81■□□□□ 0.44
Nub1P54729 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Nub1P54729 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Nub1P54729 Gm27389-201ENSMUST00000183622 195 ntBASIC17.81■□□□□ 0.44
Nub1P54729 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC17.81■□□□□ 0.44
Nub1P54729 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC17.81■□□□□ 0.44
Nub1P54729 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC17.81■□□□□ 0.44
Nub1P54729 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Nub1P54729 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nub1P54729 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.8■□□□□ 0.44
Nub1P54729 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.8■□□□□ 0.44
Nub1P54729 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Nub1P54729 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Nub1P54729 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms