Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Sox1P53783 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Golph3-205ENSMUST00000228671 2842 ntBASIC16.92■□□□□ 0.3
Sox1P53783 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC16.92■□□□□ 0.3
Sox1P53783 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Sox1P53783 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Sox1P53783 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox1P53783 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox1P53783 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Sox1P53783 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Sox1P53783 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.91■□□□□ 0.3
Sox1P53783 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Sox1P53783 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC16.9■□□□□ 0.3
Sox1P53783 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Gm4459-201ENSMUST00000118750 468 ntBASIC16.9■□□□□ 0.3
Sox1P53783 Gm12428-201ENSMUST00000119844 727 ntBASIC16.9■□□□□ 0.3
Sox1P53783 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC16.9■□□□□ 0.3
Sox1P53783 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC16.9■□□□□ 0.3
Sox1P53783 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Sox1P53783 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Sox1P53783 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Sox1P53783 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Gm9885-202ENSMUST00000186234 2209 ntBASIC16.89■□□□□ 0.29
Sox1P53783 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox1P53783 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox1P53783 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC16.89■□□□□ 0.29
Sox1P53783 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC16.89■□□□□ 0.29
Sox1P53783 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.89■□□□□ 0.29
Sox1P53783 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Sox1P53783 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Sox1P53783 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Sox1P53783 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC16.88■□□□□ 0.29
Sox1P53783 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Sox1P53783 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms