Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.99□□□□□ -0.01
Rfx3P48381 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfx3P48381 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Rfx3P48381 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfx3P48381 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfx3P48381 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC14.99□□□□□ -0.01
Rfx3P48381 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Rfx3P48381 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Rfx3P48381 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Rfx3P48381 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Gm36858-201ENSMUST00000194501 2391 ntBASIC14.98□□□□□ -0.01
Rfx3P48381 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Rfx3P48381 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.98□□□□□ -0.01
Rfx3P48381 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx3P48381 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Gm38027-201ENSMUST00000192315 235 ntBASIC14.98□□□□□ -0.01
Rfx3P48381 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Rfx3P48381 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.98□□□□□ -0.01
Rfx3P48381 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Rfx3P48381 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.97□□□□□ -0.01
Rfx3P48381 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
Rfx3P48381 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.97□□□□□ -0.01
Rfx3P48381 Timm23-208ENSMUST00000226683 750 ntBASIC14.97□□□□□ -0.01
Rfx3P48381 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rfx3P48381 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Rfx3P48381 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Rfx3P48381 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfx3P48381 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfx3P48381 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC14.96□□□□□ -0.01
Rfx3P48381 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfx3P48381 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms