Protein–RNA interactions for Protein: P47993

Xcl1, Lymphotactin, mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xcl1P47993 Gm45546-201ENSMUST00000211053 2394 ntBASIC10.87□□□□□ -0.67
Xcl1P47993 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
Xcl1P47993 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC10.87□□□□□ -0.67
Xcl1P47993 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC10.87□□□□□ -0.67
Xcl1P47993 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC10.87□□□□□ -0.67
Xcl1P47993 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Gm45723-201ENSMUST00000212135 1783 ntTSL 5 BASIC10.87□□□□□ -0.67
Xcl1P47993 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
Xcl1P47993 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Xcl1P47993 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
Xcl1P47993 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC10.86□□□□□ -0.67
Xcl1P47993 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC10.86□□□□□ -0.67
Xcl1P47993 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Ksr1-207ENSMUST00000226282 5260 ntBASIC10.86□□□□□ -0.67
Xcl1P47993 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Xcl1P47993 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
Xcl1P47993 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC10.86□□□□□ -0.67
Xcl1P47993 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC10.86□□□□□ -0.67
Xcl1P47993 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Gm43759-201ENSMUST00000196925 1261 ntBASIC10.86□□□□□ -0.67
Xcl1P47993 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Xcl1P47993 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Xcl1P47993 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Xcl1P47993 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Xcl1P47993 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Xcl1P47993 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Xcl1P47993 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Xcl1P47993 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Xcl1P47993 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Xcl1P47993 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Xcl1P47993 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC10.84□□□□□ -0.67
Xcl1P47993 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Gm27502-201ENSMUST00000183495 199 ntBASIC10.84□□□□□ -0.67
Xcl1P47993 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC10.84□□□□□ -0.67
Xcl1P47993 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Xcl1P47993 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC10.84□□□□□ -0.67
Xcl1P47993 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms