Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.84■□□□□ 0.29
Vps4bP46467 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4bP46467 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4bP46467 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Vps4bP46467 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Vps4bP46467 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
Vps4bP46467 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Vps4bP46467 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Vps4bP46467 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC16.82■□□□□ 0.28
Vps4bP46467 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Vps4bP46467 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC16.82■□□□□ 0.28
Vps4bP46467 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Snrk-201ENSMUST00000118886 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Vps4bP46467 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Vps4bP46467 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.81■□□□□ 0.28
Vps4bP46467 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.81■□□□□ 0.28
Vps4bP46467 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Vps4bP46467 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Vps4bP46467 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.8■□□□□ 0.28
Vps4bP46467 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 Gm37055-201ENSMUST00000191866 133 ntBASIC16.8■□□□□ 0.28
Vps4bP46467 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.8■□□□□ 0.28
Vps4bP46467 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Vps4bP46467 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Vps4bP46467 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Vps4bP46467 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vps4bP46467 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Vps4bP46467 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC16.79■□□□□ 0.28
Vps4bP46467 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC16.79■□□□□ 0.28
Vps4bP46467 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.79■□□□□ 0.28
Vps4bP46467 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.79■□□□□ 0.28
Vps4bP46467 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Vps4bP46467 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.79■□□□□ 0.28
Vps4bP46467 Gm3375-201ENSMUST00000203929 796 ntBASIC16.79■□□□□ 0.28
Vps4bP46467 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.79■□□□□ 0.28
Vps4bP46467 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Vps4bP46467 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Vps4bP46467 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms