Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sox18P43680 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
Sox18P43680 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC15.87■□□□□ 0.13
Sox18P43680 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
Sox18P43680 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Sox18P43680 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Sox18P43680 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Sox18P43680 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC15.86■□□□□ 0.13
Sox18P43680 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
Sox18P43680 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Sox18P43680 Gm4995-201ENSMUST00000117247 432 ntBASIC15.86■□□□□ 0.13
Sox18P43680 Gm13186-201ENSMUST00000118031 316 ntBASIC15.86■□□□□ 0.13
Sox18P43680 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC15.86■□□□□ 0.13
Sox18P43680 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC15.86■□□□□ 0.13
Sox18P43680 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Sox18P43680 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.86■□□□□ 0.13
Sox18P43680 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.86■□□□□ 0.13
Sox18P43680 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC15.86■□□□□ 0.13
Sox18P43680 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Sox18P43680 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox18P43680 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm43371-201ENSMUST00000202838 1031 ntBASIC15.85■□□□□ 0.13
Sox18P43680 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC15.85■□□□□ 0.13
Sox18P43680 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC15.85■□□□□ 0.13
Sox18P43680 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox18P43680 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
Sox18P43680 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC15.85■□□□□ 0.13
Sox18P43680 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox18P43680 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.85■□□□□ 0.13
Sox18P43680 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Sox18P43680 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Sox18P43680 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Gm14057-201ENSMUST00000120631 482 ntBASIC15.84■□□□□ 0.13
Sox18P43680 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.84■□□□□ 0.13
Sox18P43680 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Sox18P43680 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox18P43680 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Sox18P43680 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms