Protein–RNA interactions for Protein: P43247

Msh2, DNA mismatch repair protein Msh2, mousemouse

Known RBP Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh2P43247 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.1■□□□□ 0.33
Msh2P43247 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Msh2P43247 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Msh2P43247 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Msh2P43247 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Msh2P43247 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Gm24841-201ENSMUST00000158676 357 ntBASIC17.09■□□□□ 0.33
Msh2P43247 Gm37055-201ENSMUST00000191866 133 ntBASIC17.09■□□□□ 0.33
Msh2P43247 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.09■□□□□ 0.33
Msh2P43247 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Odf3b-204ENSMUST00000227834 930 ntBASIC17.09■□□□□ 0.33
Msh2P43247 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Msh2P43247 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Msh2P43247 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.09■□□□□ 0.33
Msh2P43247 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Msh2P43247 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh2P43247 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
Msh2P43247 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
Msh2P43247 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Msh2P43247 Cep135-202ENSMUST00000121979 5537 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Msh2P43247 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Msh2P43247 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.08■□□□□ 0.32
Msh2P43247 Gm21814-202ENSMUST00000203277 873 ntBASIC17.08■□□□□ 0.32
Msh2P43247 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Msh2P43247 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC17.08■□□□□ 0.32
Msh2P43247 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 AC093043.3-201ENSMUST00000226531 2273 ntBASIC17.08■□□□□ 0.32
Msh2P43247 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Msh2P43247 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Msh2P43247 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.07■□□□□ 0.32
Msh2P43247 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Msh2P43247 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Msh2P43247 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Msh2P43247 Gm3375-201ENSMUST00000203929 796 ntBASIC17.07■□□□□ 0.32
Msh2P43247 Gm5417-201ENSMUST00000079706 384 ntBASIC17.07■□□□□ 0.32
Msh2P43247 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC17.07■□□□□ 0.32
Msh2P43247 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Gm43072-201ENSMUST00000200283 1671 ntBASIC17.07■□□□□ 0.32
Msh2P43247 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Msh2P43247 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Msh2P43247 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Msh2P43247 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.06■□□□□ 0.32
Msh2P43247 Mir6982-201ENSMUST00000184354 68 ntBASIC17.06■□□□□ 0.32
Msh2P43247 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms