Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Gm19721-201ENSMUST00000195284 1764 ntBASIC13.75□□□□□ -0.21
Abca1P41233 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC13.75□□□□□ -0.21
Abca1P41233 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Abca1P41233 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Abca1P41233 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.74□□□□□ -0.21
Abca1P41233 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC13.74□□□□□ -0.21
Abca1P41233 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Abca1P41233 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC13.74□□□□□ -0.21
Abca1P41233 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC13.74□□□□□ -0.21
Abca1P41233 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC13.74□□□□□ -0.21
Abca1P41233 Gm37935-201ENSMUST00000192012 982 ntBASIC13.74□□□□□ -0.21
Abca1P41233 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Abca1P41233 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Abca1P41233 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Gm44832-201ENSMUST00000208849 2303 ntBASIC13.73□□□□□ -0.21
Abca1P41233 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Gm11452-201ENSMUST00000122376 690 ntBASIC13.73□□□□□ -0.21
Abca1P41233 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC13.73□□□□□ -0.21
Abca1P41233 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Gm18206-201ENSMUST00000207027 926 ntBASIC13.73□□□□□ -0.21
Abca1P41233 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.73□□□□□ -0.21
Abca1P41233 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Abca1P41233 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.73□□□□□ -0.21
Abca1P41233 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Abca1P41233 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
Abca1P41233 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Abca1P41233 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Abca1P41233 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC13.72□□□□□ -0.21
Abca1P41233 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC13.72□□□□□ -0.21
Abca1P41233 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.72□□□□□ -0.21
Abca1P41233 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC13.72□□□□□ -0.21
Abca1P41233 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC13.72□□□□□ -0.21
Abca1P41233 Rps4l-201ENSMUST00000071745 943 ntBASIC13.72□□□□□ -0.21
Abca1P41233 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Abca1P41233 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Abca1P41233 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Abca1P41233 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 104.4 ms