Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HmgclP38060 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
HmgclP38060 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC16.35■□□□□ 0.21
HmgclP38060 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
HmgclP38060 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Gm10013-201ENSMUST00000106074 672 ntBASIC16.35■□□□□ 0.21
HmgclP38060 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
HmgclP38060 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
HmgclP38060 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC16.35■□□□□ 0.21
HmgclP38060 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
HmgclP38060 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
HmgclP38060 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
HmgclP38060 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
HmgclP38060 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
HmgclP38060 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.34■□□□□ 0.21
HmgclP38060 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Elf2-202ENSMUST00000091144 2366 ntTSL 5 BASIC16.34■□□□□ 0.21
HmgclP38060 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Gm11355-201ENSMUST00000121120 306 ntBASIC16.34■□□□□ 0.21
HmgclP38060 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
HmgclP38060 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
HmgclP38060 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
HmgclP38060 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HmgclP38060 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HmgclP38060 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HmgclP38060 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
HmgclP38060 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
HmgclP38060 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
HmgclP38060 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.33■□□□□ 0.2
HmgclP38060 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC16.33■□□□□ 0.2
HmgclP38060 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC16.33■□□□□ 0.2
HmgclP38060 Gm37722-201ENSMUST00000193757 208 ntBASIC16.33■□□□□ 0.2
HmgclP38060 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.33■□□□□ 0.2
HmgclP38060 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
HmgclP38060 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
HmgclP38060 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
HmgclP38060 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
HmgclP38060 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
HmgclP38060 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.32■□□□□ 0.2
HmgclP38060 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Mir7071-201ENSMUST00000184847 69 ntBASIC16.32■□□□□ 0.2
HmgclP38060 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.32■□□□□ 0.2
HmgclP38060 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HmgclP38060 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC16.31■□□□□ 0.2
HmgclP38060 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HmgclP38060 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
HmgclP38060 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HmgclP38060 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms