Protein–RNA interactions for Protein: P35737

H2-DMb1, Class II histocompatibility antigen, M beta 1 chain, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2-DMb1P35737 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Idnk-204ENSMUST00000226010 1898 ntBASIC12.85□□□□□ -0.35
H2-DMb1P35737 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Gm43353-201ENSMUST00000199224 1295 ntBASIC12.85□□□□□ -0.35
H2-DMb1P35737 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.85□□□□□ -0.35
H2-DMb1P35737 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
H2-DMb1P35737 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC12.84□□□□□ -0.35
H2-DMb1P35737 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
H2-DMb1P35737 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
H2-DMb1P35737 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC12.83□□□□□ -0.36
H2-DMb1P35737 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Gm2274-201ENSMUST00000184539 609 ntBASIC12.83□□□□□ -0.36
H2-DMb1P35737 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
H2-DMb1P35737 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms