Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Foxa1P35582 Gm13216-201ENSMUST00000117145 591 ntBASIC15.35■□□□□ 0.05
Foxa1P35582 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC15.35■□□□□ 0.05
Foxa1P35582 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Foxa1P35582 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
Foxa1P35582 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Foxa1P35582 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC15.34■□□□□ 0.05
Foxa1P35582 Gm11355-201ENSMUST00000121120 306 ntBASIC15.34■□□□□ 0.05
Foxa1P35582 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC15.34■□□□□ 0.05
Foxa1P35582 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Foxa1P35582 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Foxa1P35582 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Foxa1P35582 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC15.34■□□□□ 0.05
Foxa1P35582 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Foxa1P35582 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC15.33■□□□□ 0.05
Foxa1P35582 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Foxa1P35582 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC15.33■□□□□ 0.04
Foxa1P35582 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Foxa1P35582 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Foxa1P35582 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
Foxa1P35582 Gm37722-201ENSMUST00000193757 208 ntBASIC15.33■□□□□ 0.04
Foxa1P35582 Gm18421-201ENSMUST00000204122 625 ntBASIC15.33■□□□□ 0.04
Foxa1P35582 AC122351.1-201ENSMUST00000220467 126 ntBASIC15.33■□□□□ 0.04
Foxa1P35582 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Foxa1P35582 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Foxa1P35582 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.33■□□□□ 0.04
Foxa1P35582 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
Foxa1P35582 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Foxa1P35582 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.32■□□□□ 0.04
Foxa1P35582 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Foxa1P35582 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Foxa1P35582 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Foxa1P35582 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Foxa1P35582 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Foxa1P35582 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms