Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Cd40P27512 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC15.01□□□□□ -0.01
Cd40P27512 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Cd40P27512 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC15.01□□□□□ -0.01
Cd40P27512 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
Cd40P27512 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Gm45774-201ENSMUST00000211992 2665 ntBASIC15.01□□□□□ -0.01
Cd40P27512 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.01□□□□□ -0.01
Cd40P27512 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Cd40P27512 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40P27512 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Cd40P27512 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC15□□□□□ -0.01
Cd40P27512 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40P27512 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC15□□□□□ -0.01
Cd40P27512 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Cd40P27512 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Cd40P27512 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC15□□□□□ -0.01
Cd40P27512 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Cd40P27512 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.99□□□□□ -0.01
Cd40P27512 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Cd40P27512 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC14.99□□□□□ -0.01
Cd40P27512 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC14.99□□□□□ -0.01
Cd40P27512 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Cd40P27512 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC14.99□□□□□ -0.01
Cd40P27512 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.98□□□□□ -0.01
Cd40P27512 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cd40P27512 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cd40P27512 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
Cd40P27512 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC14.98□□□□□ -0.01
Cd40P27512 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC14.98□□□□□ -0.01
Cd40P27512 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Cd40P27512 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.98□□□□□ -0.01
Cd40P27512 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Cd40P27512 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Cd40P27512 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.97□□□□□ -0.01
Cd40P27512 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Cd40P27512 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms