Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Pde6bP23440 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Pde6bP23440 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pde6bP23440 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Pde6bP23440 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC18.05■□□□□ 0.48
Pde6bP23440 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Pde6bP23440 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
Pde6bP23440 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.04■□□□□ 0.48
Pde6bP23440 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pde6bP23440 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Pde6bP23440 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC18.04■□□□□ 0.48
Pde6bP23440 Gm28659-201ENSMUST00000188013 759 ntBASIC18.04■□□□□ 0.48
Pde6bP23440 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC18.04■□□□□ 0.48
Pde6bP23440 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Hivep3-201ENSMUST00000084306 2973 ntBASIC18.04■□□□□ 0.48
Pde6bP23440 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.04■□□□□ 0.48
Pde6bP23440 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Pde6bP23440 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Pde6bP23440 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.03■□□□□ 0.48
Pde6bP23440 Gm12895-201ENSMUST00000122214 226 ntBASIC18.03■□□□□ 0.48
Pde6bP23440 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Pde6bP23440 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Pde6bP23440 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Pde6bP23440 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.03■□□□□ 0.48
Pde6bP23440 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.02■□□□□ 0.48
Pde6bP23440 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pde6bP23440 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Pde6bP23440 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pde6bP23440 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC18.02■□□□□ 0.48
Pde6bP23440 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.02■□□□□ 0.48
Pde6bP23440 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Pde6bP23440 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Pde6bP23440 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Pde6bP23440 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6bP23440 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6bP23440 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6bP23440 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Pde6bP23440 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.01■□□□□ 0.47
Pde6bP23440 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.01■□□□□ 0.47
Pde6bP23440 Gm26871-202ENSMUST00000180774 695 ntTSL 2 BASIC18.01■□□□□ 0.47
Pde6bP23440 AC164629.2-201ENSMUST00000217916 270 ntBASIC18.01■□□□□ 0.47
Pde6bP23440 AC153889.1-201ENSMUST00000219257 330 ntBASIC18.01■□□□□ 0.47
Pde6bP23440 Gm43294-201ENSMUST00000202850 2490 ntBASIC18.01■□□□□ 0.47
Pde6bP23440 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Gm45412-201ENSMUST00000210217 2275 ntBASIC18.01■□□□□ 0.47
Pde6bP23440 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Pde6bP23440 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Pde6bP23440 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC18■□□□□ 0.47
Pde6bP23440 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC18■□□□□ 0.47
Pde6bP23440 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Pde6bP23440 Gm27459-201ENSMUST00000184860 107 ntBASIC18■□□□□ 0.47
Pde6bP23440 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms