Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC15.18■□□□□ 0.02
Cbx3P23198 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Cbx3P23198 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Cbx3P23198 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cbx3P23198 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Cbx3P23198 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Gm21168-201ENSMUST00000199646 1096 ntBASIC15.17■□□□□ 0.02
Cbx3P23198 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Gm37019-201ENSMUST00000192133 2134 ntBASIC15.17■□□□□ 0.02
Cbx3P23198 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
Cbx3P23198 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Cbx3P23198 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.16■□□□□ 0.02
Cbx3P23198 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
Cbx3P23198 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Cbx3P23198 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
Cbx3P23198 Asic1-205ENSMUST00000228185 1818 ntBASIC15.15■□□□□ 0.02
Cbx3P23198 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
Cbx3P23198 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
Cbx3P23198 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
Cbx3P23198 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
Cbx3P23198 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 BC024978-204ENSMUST00000179391 1748 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
Cbx3P23198 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Ptpa-203ENSMUST00000113603 2169 ntTSL 5 BASIC15.14■□□□□ 0.01
Cbx3P23198 Tulp3-201ENSMUST00000001562 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Cbx3P23198 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms