Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.9■□□□□ 0.14
BdnfP21237 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BdnfP21237 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BdnfP21237 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BdnfP21237 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC15.9■□□□□ 0.14
BdnfP21237 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
BdnfP21237 Gm12085-201ENSMUST00000119263 940 ntBASIC15.9■□□□□ 0.14
BdnfP21237 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC15.9■□□□□ 0.14
BdnfP21237 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.9■□□□□ 0.14
BdnfP21237 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
BdnfP21237 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
BdnfP21237 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
BdnfP21237 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
BdnfP21237 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC15.89■□□□□ 0.13
BdnfP21237 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.89■□□□□ 0.13
BdnfP21237 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC15.89■□□□□ 0.13
BdnfP21237 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
BdnfP21237 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.89■□□□□ 0.13
BdnfP21237 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.89■□□□□ 0.13
BdnfP21237 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.89■□□□□ 0.13
BdnfP21237 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC15.89■□□□□ 0.13
BdnfP21237 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
BdnfP21237 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
BdnfP21237 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
BdnfP21237 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
BdnfP21237 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.89■□□□□ 0.13
BdnfP21237 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Gm20760-201ENSMUST00000179197 648 ntBASIC15.88■□□□□ 0.13
BdnfP21237 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.88■□□□□ 0.13
BdnfP21237 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.88■□□□□ 0.13
BdnfP21237 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BdnfP21237 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
BdnfP21237 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BdnfP21237 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
BdnfP21237 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC15.88■□□□□ 0.13
BdnfP21237 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
BdnfP21237 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
BdnfP21237 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
BdnfP21237 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Gm13168-201ENSMUST00000121771 632 ntBASIC15.87■□□□□ 0.13
BdnfP21237 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC15.87■□□□□ 0.13
BdnfP21237 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
BdnfP21237 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms