Protein–RNA interactions for Protein: P20152

Vim, Vimentin, mousemouse

Known RBP Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VimP20152 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Nespas-201ENSMUST00000143738 1083 ntBASIC16.95■□□□□ 0.3
VimP20152 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
VimP20152 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
VimP20152 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
VimP20152 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
VimP20152 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
VimP20152 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
VimP20152 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC16.94■□□□□ 0.3
VimP20152 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Slc25a32-201ENSMUST00000022908 5905 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 5730480H06Rik-205ENSMUST00000196950 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
VimP20152 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Gm6420-201ENSMUST00000193885 723 ntBASIC16.94■□□□□ 0.3
VimP20152 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
VimP20152 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
VimP20152 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
VimP20152 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
VimP20152 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
VimP20152 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.94■□□□□ 0.3
VimP20152 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.93■□□□□ 0.3
VimP20152 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VimP20152 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Dbnl-202ENSMUST00000102928 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
VimP20152 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC16.93■□□□□ 0.3
VimP20152 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
VimP20152 Gm6139-201ENSMUST00000079261 882 ntBASIC16.93■□□□□ 0.3
VimP20152 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC16.93■□□□□ 0.3
VimP20152 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VimP20152 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
VimP20152 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
VimP20152 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.92■□□□□ 0.3
VimP20152 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
VimP20152 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC16.92■□□□□ 0.3
VimP20152 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
VimP20152 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC16.91■□□□□ 0.3
VimP20152 Gm13234-201ENSMUST00000120010 747 ntBASIC16.91■□□□□ 0.3
VimP20152 Gm43017-201ENSMUST00000198296 752 ntBASIC16.91■□□□□ 0.3
VimP20152 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.91■□□□□ 0.3
VimP20152 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
VimP20152 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
VimP20152 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms