Protein–RNA interactions for Protein: P18340

Cxcl9, C-X-C motif chemokine 9, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl9P18340 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl9P18340 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Cxcl9P18340 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC18.81■□□□□ 0.6
Cxcl9P18340 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC18.81■□□□□ 0.6
Cxcl9P18340 Gm17178-201ENSMUST00000163273 357 ntTSL 5 BASIC18.81■□□□□ 0.6
Cxcl9P18340 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Cxcl9P18340 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Cxcl9P18340 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Cxcl9P18340 Ddx41-204ENSMUST00000224765 2199 ntBASIC18.81■□□□□ 0.6
Cxcl9P18340 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Cxcl9P18340 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC18.8■□□□□ 0.6
Cxcl9P18340 Gm27646-201ENSMUST00000183989 110 ntBASIC18.8■□□□□ 0.6
Cxcl9P18340 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Cxcl9P18340 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cxcl9P18340 AC159295.1-201ENSMUST00000225326 940 ntBASIC18.79■□□□□ 0.6
Cxcl9P18340 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Cxcl9P18340 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Cxcl9P18340 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Cxcl9P18340 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
Cxcl9P18340 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Gm43438-201ENSMUST00000198133 379 ntBASIC18.78■□□□□ 0.6
Cxcl9P18340 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.78■□□□□ 0.6
Cxcl9P18340 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.78■□□□□ 0.6
Cxcl9P18340 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Cxcl9P18340 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC18.78■□□□□ 0.6
Cxcl9P18340 AC157650.3-201ENSMUST00000225058 1476 ntBASIC18.77■□□□□ 0.6
Cxcl9P18340 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.77■□□□□ 0.6
Cxcl9P18340 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gm20949-201ENSMUST00000206478 952 ntBASIC18.77■□□□□ 0.6
Cxcl9P18340 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC18.77■□□□□ 0.6
Cxcl9P18340 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Cxcl9P18340 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cxcl9P18340 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cxcl9P18340 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Cxcl9P18340 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl9P18340 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl9P18340 Slc35b2-202ENSMUST00000223987 1766 ntBASIC18.76■□□□□ 0.59
Cxcl9P18340 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl9P18340 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl9P18340 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Cxcl9P18340 Gm27300-201ENSMUST00000184085 97 ntBASIC18.76■□□□□ 0.59
Cxcl9P18340 Gm27335-201ENSMUST00000184758 97 ntBASIC18.76■□□□□ 0.59
Cxcl9P18340 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC18.76■□□□□ 0.59
Cxcl9P18340 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms