Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.65□□□□□ -0.06
Ccl3P10855 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.64□□□□□ -0.07
Ccl3P10855 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccl3P10855 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
Ccl3P10855 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.64□□□□□ -0.07
Ccl3P10855 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Gm7506-201ENSMUST00000207758 815 ntBASIC14.64□□□□□ -0.07
Ccl3P10855 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.64□□□□□ -0.07
Ccl3P10855 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Ccl3P10855 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Ccl3P10855 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Ccl3P10855 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.64□□□□□ -0.07
Ccl3P10855 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Gm9889-202ENSMUST00000206983 1577 ntBASIC14.64□□□□□ -0.07
Ccl3P10855 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ccl3P10855 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccl3P10855 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl3P10855 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC14.63□□□□□ -0.07
Ccl3P10855 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.63□□□□□ -0.07
Ccl3P10855 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Ccl3P10855 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC14.63□□□□□ -0.07
Ccl3P10855 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Ccl3P10855 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Dmtn-207ENSMUST00000228001 2437 ntBASIC14.63□□□□□ -0.07
Ccl3P10855 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Ccl3P10855 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
Ccl3P10855 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Gm25990-201ENSMUST00000102440 86 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.62□□□□□ -0.07
Ccl3P10855 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
Ccl3P10855 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccl3P10855 Gm13418-201ENSMUST00000119097 944 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Gm11594-201ENSMUST00000122313 162 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Gm4535-201ENSMUST00000182274 558 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.62□□□□□ -0.07
Ccl3P10855 AC107711.5-202ENSMUST00000226429 702 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Ccl3P10855 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Gm10355-201ENSMUST00000097146 517 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.62□□□□□ -0.07
Ccl3P10855 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Ccl3P10855 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Ccl3P10855 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Ccl3P10855 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Ccl3P10855 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.61□□□□□ -0.07
Ccl3P10855 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Ccl3P10855 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.61□□□□□ -0.07
Ccl3P10855 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms