Protein–RNA interactions for Protein: P10629

Hoxc6, Homeobox protein Hox-C6, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc6P10629 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc6P10629 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC18.38■□□□□ 0.53
Hoxc6P10629 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.38■□□□□ 0.53
Hoxc6P10629 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hoxc6P10629 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC18.38■□□□□ 0.53
Hoxc6P10629 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Gm43808-201ENSMUST00000202534 2065 ntBASIC18.37■□□□□ 0.53
Hoxc6P10629 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Gm13418-201ENSMUST00000119097 944 ntBASIC18.37■□□□□ 0.53
Hoxc6P10629 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC18.37■□□□□ 0.53
Hoxc6P10629 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC18.37■□□□□ 0.53
Hoxc6P10629 AC159093.1-201ENSMUST00000227779 380 ntBASIC18.37■□□□□ 0.53
Hoxc6P10629 AC114585.2-202ENSMUST00000228094 426 ntBASIC18.37■□□□□ 0.53
Hoxc6P10629 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC18.37■□□□□ 0.53
Hoxc6P10629 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hoxc6P10629 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Gm7616-201ENSMUST00000143112 624 ntTSL 3 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
Hoxc6P10629 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Gm2213-201ENSMUST00000197485 688 ntBASIC18.36■□□□□ 0.53
Hoxc6P10629 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Gm45203-201ENSMUST00000206384 1831 ntBASIC18.36■□□□□ 0.53
Hoxc6P10629 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC18.36■□□□□ 0.53
Hoxc6P10629 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hoxc6P10629 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.36■□□□□ 0.53
Hoxc6P10629 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc6P10629 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Gm15467-201ENSMUST00000120582 445 ntBASIC18.35■□□□□ 0.53
Hoxc6P10629 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC18.35■□□□□ 0.53
Hoxc6P10629 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Hoxc6P10629 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Il10rb-201ENSMUST00000023691 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.35■□□□□ 0.53
Hoxc6P10629 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hoxc6P10629 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Hoxc6P10629 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxc6P10629 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxc6P10629 Gm7506-201ENSMUST00000207758 815 ntBASIC18.34■□□□□ 0.53
Hoxc6P10629 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.34■□□□□ 0.53
Hoxc6P10629 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Hoxc6P10629 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC18.34■□□□□ 0.53
Hoxc6P10629 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Hoxc6P10629 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hoxc6P10629 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc6P10629 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc6P10629 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Hoxc6P10629 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Hoxc6P10629 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hoxc6P10629 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms