Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Chmp6P0C0A3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Gm37166-201ENSMUST00000195473 2474 ntBASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Gm7213-201ENSMUST00000215977 950 ntBASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
Chmp6P0C0A3 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Gm22697-201ENSMUST00000175194 63 ntBASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Gm27000-201ENSMUST00000182943 842 ntBASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Chmp6P0C0A3 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Gm18101-201ENSMUST00000215769 548 ntBASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Chmp6P0C0A3 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC18.03■□□□□ 0.48
Chmp6P0C0A3 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Gm20628-201ENSMUST00000177363 3215 ntBASIC18.02■□□□□ 0.48
Chmp6P0C0A3 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms