Protein–RNA interactions for Protein: P09633

Hoxc9, Homeobox protein Hox-C9, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc9P09633 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Hoxc9P09633 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Hoxc9P09633 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Hoxc9P09633 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
Hoxc9P09633 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.47■■□□□ 1.03
Hoxc9P09633 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.47■■□□□ 1.03
Hoxc9P09633 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Hoxc9P09633 Dapk1-207ENSMUST00000226059 5009 ntBASIC21.47■■□□□ 1.03
Hoxc9P09633 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Gm4459-201ENSMUST00000118750 468 ntBASIC21.46■■□□□ 1.03
Hoxc9P09633 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC21.46■■□□□ 1.03
Hoxc9P09633 Gm43332-201ENSMUST00000202511 1044 ntBASIC21.46■■□□□ 1.03
Hoxc9P09633 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.46■■□□□ 1.03
Hoxc9P09633 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC21.46■■□□□ 1.03
Hoxc9P09633 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC21.46■■□□□ 1.03
Hoxc9P09633 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Hoxc9P09633 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC21.45■■□□□ 1.02
Hoxc9P09633 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Gm15173-201ENSMUST00000122049 433 ntBASIC21.45■■□□□ 1.02
Hoxc9P09633 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC21.45■■□□□ 1.02
Hoxc9P09633 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC21.45■■□□□ 1.02
Hoxc9P09633 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC21.45■■□□□ 1.02
Hoxc9P09633 Gm43073-201ENSMUST00000198200 1189 ntBASIC21.45■■□□□ 1.02
Hoxc9P09633 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Hoxc9P09633 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC21.45■■□□□ 1.02
Hoxc9P09633 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Hoxc9P09633 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
Hoxc9P09633 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.44■■□□□ 1.02
Hoxc9P09633 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm8097-201ENSMUST00000117903 829 ntBASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm11779-201ENSMUST00000118541 368 ntBASIC21.44■■□□□ 1.02
Hoxc9P09633 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm12497-201ENSMUST00000138778 237 ntBASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.44■■□□□ 1.02
Hoxc9P09633 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Hoxc9P09633 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Gm11780-201ENSMUST00000136880 516 ntBASIC21.43■■□□□ 1.02
Hoxc9P09633 Gm8000-201ENSMUST00000188378 592 ntBASIC21.43■■□□□ 1.02
Hoxc9P09633 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC21.43■■□□□ 1.02
Hoxc9P09633 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
Hoxc9P09633 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Hoxc9P09633 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.43■■□□□ 1.02
Hoxc9P09633 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
Hoxc9P09633 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC21.42■■□□□ 1.02
Hoxc9P09633 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Hoxc9P09633 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms