Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa9P09631 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa9P09631 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa9P09631 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Hoxa9P09631 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.64■□□□□ 0.25
Hoxa9P09631 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.64■□□□□ 0.25
Hoxa9P09631 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.64■□□□□ 0.25
Hoxa9P09631 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Gm43514-201ENSMUST00000198852 424 ntBASIC16.64■□□□□ 0.25
Hoxa9P09631 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Hoxa9P09631 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Hoxa9P09631 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.63■□□□□ 0.25
Hoxa9P09631 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC16.63■□□□□ 0.25
Hoxa9P09631 Gm6443-201ENSMUST00000203599 874 ntBASIC16.63■□□□□ 0.25
Hoxa9P09631 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.63■□□□□ 0.25
Hoxa9P09631 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Hoxa9P09631 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.62■□□□□ 0.25
Hoxa9P09631 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
Hoxa9P09631 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.62■□□□□ 0.25
Hoxa9P09631 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 AC153794.1-201ENSMUST00000169148 126 ntBASIC16.62■□□□□ 0.25
Hoxa9P09631 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.62■□□□□ 0.25
Hoxa9P09631 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Hoxa9P09631 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Hoxa9P09631 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxa9P09631 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
Hoxa9P09631 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC16.61■□□□□ 0.25
Hoxa9P09631 Gm10052-201ENSMUST00000168019 960 ntBASIC16.61■□□□□ 0.25
Hoxa9P09631 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC16.61■□□□□ 0.25
Hoxa9P09631 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Gm18195-201ENSMUST00000207604 706 ntBASIC16.61■□□□□ 0.25
Hoxa9P09631 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC16.61■□□□□ 0.25
Hoxa9P09631 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.61■□□□□ 0.25
Hoxa9P09631 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Gm7729-201ENSMUST00000050143 801 ntBASIC16.61■□□□□ 0.25
Hoxa9P09631 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Hoxa9P09631 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Hoxa9P09631 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa9P09631 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa9P09631 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa9P09631 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Hoxa9P09631 Gm45774-201ENSMUST00000211992 2665 ntBASIC16.6■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms