Protein–RNA interactions for Protein: P06328

Ig heavy chain V region VH558 B4, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06328 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P06328 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
P06328 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
P06328 AC069562.2-201ENSMUST00000224644 2146 ntBASIC12.16□□□□□ -0.46
P06328 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
P06328 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
P06328 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.15□□□□□ -0.46
P06328 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
P06328 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 AC175538.1-201ENSMUST00000225343 1269 ntBASIC12.15□□□□□ -0.46
P06328 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.15□□□□□ -0.46
P06328 Gm45203-201ENSMUST00000206384 1831 ntBASIC12.15□□□□□ -0.46
P06328 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC12.15□□□□□ -0.46
P06328 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC12.15□□□□□ -0.46
P06328 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
P06328 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06328 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06328 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
P06328 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
P06328 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.14□□□□□ -0.47
P06328 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P06328 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
P06328 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC12.14□□□□□ -0.47
P06328 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC12.14□□□□□ -0.47
P06328 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC12.14□□□□□ -0.47
P06328 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.14□□□□□ -0.47
P06328 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
P06328 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
P06328 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
P06328 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.14□□□□□ -0.47
P06328 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC12.13□□□□□ -0.47
P06328 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.13□□□□□ -0.47
P06328 Rgs7-203ENSMUST00000192227 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P06328 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC12.13□□□□□ -0.47
P06328 Mir1199-201ENSMUST00000117015 119 ntBASIC12.13□□□□□ -0.47
P06328 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.13□□□□□ -0.47
P06328 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC12.13□□□□□ -0.47
P06328 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
P06328 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
P06328 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
P06328 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.13□□□□□ -0.47
P06328 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms